SPT5CGD
C2_01480W_A|orf19.1453CAL0000192268
Protein similar to S. cerevisiae Spt5p transcription elongation factor; transposon mutation affects filamentous growth
InVitro Pooled
Temp37_effect_size
FBS_effect_size
YPD_effect_size
SDS_effect_size
NoIron_effect_size
NaCl_effect_size
Sorbitol_effect_size
YNB_effect_size
MGX_mean
FLC_mean
CAS_mean
See explanation for features in paper: Fu, C., Zhang, X., Veri, A.O. et al. Leveraging machine learning essentiality predictions and chemogenomic interactions to identify antifungal targets. Nat Commun 12, 6497 (2021). https://doi.org/10.1038/s41467-021-26850-3
FeatureValuePlot
version
2.00
Note
N/A
Registry ID
GELC0005
Merck Strain ID
N/A
Plate
Plate 01
Position
A09
No_DOX_score
0.00
DOX_score
1.25
Essential_verdict
GD

In Vitro Arrayed Screen

GRACE microscopy image
DOX at 30°C

Filamentation Screen

co-culture with macrophages w/ FITC-conjugated anti-Candida albicans antibody

Filamentation MO FITC REP1

co-culture with macrophages w/ phase and FITC channel images

Filamentation MO Merge REP1

Tissue Culture Conditions

Filamentation TC REP1
Details

The screen took place over two days - each plate was screened in technical duplicate both in co-culture with macrophages (MO) and in monoculture under tissue culture conditions (TC). For the TC screen, only phase images were acquired. For the MO screen, co-cultures were stained using a FITC-conjugated anti-Candida albicans antibody therefore phase and FITC channel images were acquired. Each mutant has 6 corresponding images: 2 phase images from the TC screen (one per replicate) - 2 FITC channel images from the MO screen - and 2 merge (phase + FITC) images from the MO screen. GRACE plates 1-17 were screened in duplicate on one day - alongside one replicate of plate 25 and GRACE plates 18-24 were screened in duplicate on another day - alongside the second replicate of plate 25.

Publication

Case NT, Westman J, Hallett MT, Plumb J, Farheen A, Maxson ME, MacAlpine J, Liston SD, Hube B, Robbins N, Whitesell L, Grinstein S, Cowen LE. (2023). Respiration supports intraphagosomal filamentation and escape of Candida albicans from macrophages.

mBio 14:e02745-23